慶應義塾大学 堀田研究室

Publications in 2024

2024 OCT
Special Issue: Tunicates in Evolutionary Developmental Biology: Perspective Staring into Crystal Balls: Understanding Evolution and Development of in vivo Aquatic Organismal Transparency

Kohji Hotta, Shunsuke O Miyasaka, Kotaro Oka and Takumi T. Shito

Frontiers in Ecology and Evolution, section Evolutionary Developmental Biology

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Publications in 2023

2023 JAN
Transitions of motor neuron activities during Ciona development

Madoka K. Utsumi, Kotaro Oka, Kohji Hotta

Frontiers in Cell and Developmental Biology

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2023 JUN
Distribution changes of non-self-test cells and self-tunic cells surrounding the outer body during Ciona metamorphosis

Nozomu M.Totsuka, Satoshi Kuwana, Satoshi Sawai, Kotaro Oka, Yasunori Sasakura, and Kohji Hotta

Developmental Dynamics

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2023 OCT
Multimodal factor evaluation system for organismal transparency by hyperspectral imaging

Takumi T. Shito, Kotaro Oka, Kohji Hotta

PLoS ONE

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2023 NOV
Establishment of a developmental atlas and transgenetic tools in the ascidian Styela clava

Boyan Lin, Wenjie Shi, Qiogxuan Lu, Takumi T. Shito, Haiyan Yu, Bo dong

Marine Life Science & Technology

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Publications 2022

2022 SEP
MiniSOG2-mediated Specific Photoablation of Motor Neurons in Ascidian Embryos

Madoka K. Utsumi, Taichi Akahoshi, Kotaro Oka, Kohji Hotta

bioprotocol

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2022 OCT
Admp regulates tail bending by controlling ventral epidermal cell polarity via phosphorylated myosin localization

Yuki S. Kogure, Hiromochi Muraoka, Wataru C. Koizumi, Raphaël Gelin-alessi, Benoit Godard, Kotaro Oka, C. P. Heisenberg, Kohji Hotta.

Development

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Publications in 2021

2021 JAN
Sexual and asexual development: two distinct programs producing the same tunicate

Kowarsky M, Anselmi C, Hotta K, Burighel P, Zaniolo G, Caicci F, Rosental B, Neff NF, Ishizuka KJ, Palmeri KJ, Okamoto J, Gordon T, Weissman IL, Quake SR, Manni L, Voskoboynik A.

Cell Rep.

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2021 JAN
Two-Round Ca2+ Transient in Papillae by Mechanical Stimulation Induces Metamorphosis in the Ascidian Ciona intestinalis typeA.

Maiki K. Wakai, Mitsuru J. Nakamura, Satoshi Sawai, Kohji Hotta, and Kotaro Oka

Proc Biol Sci.

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2021 MAR
Spatiotemporal dynamics of single cell stiffness in the early developing ascidian chordate embryo

Fujii Y, Koizumi WC, Imai T, Yokobori M, Matsuo T, Oka K, Hotta K, Okajima T.

Commun Biol

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2021 NOV
Bilaterally asymmetric helical myofibrils in ascidian tadpole larvae

Koichi Matsuo, Ryota Tamura, Kohji Hotta, Mayu Okada, Akihisa Takeuchi, Yanlin Wu, Koh Hashimoto, Hidekazu Takano, Atsushi Momose, Atsuo Nishino

Frontiers in Cell and Developmental Biology

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2021 DEC
A single motor neuron determines the rhythm of early motor behavior in Ciona

Taichi Akahoshi, Kouhei Oonuma, Makoto Murakami, Takeo Horie, Takehiro G. Kusakabe, Kotaro Oka, Kohji Hotta

Science Advances

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2021 DEC
Developmental Table and Three-dimensional Embryological Image Resource of the Ascidian Ascidiella aspersa

Haruka M Funakoshi, Takumi T. Shito, Kotaro Oka, Kohji HOTTA

Frontiers in Cell and Developmental Biology

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Publications in 2020

2020 JAN
Different strategies for tissue scaling in dwarf tailbud embryos revealed by single-cell analysis

Kaoru D Matsumura, Mitsuru J. Nakamura, Wataru C. Koizumi, Kohji Hotta, Kotaro Oka

Dev Biol

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2020 SEP
The ontology of the anatomy and development of the solitary ascidian Ciona: the swimming larva and its metamorphosis.

Kohji Hotta, Delphine Dauga and Lucia Manni

Sci Rep.

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2020 NOV
Phylogenetic comparison of egg transparency in ascidians by hyperspectral imaging

Takumi T. Shito, Naohiro Hasegawa, Kotaro Oka, and Kohji Hotta

Sci Rep.

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